bioRxiv : the preprint server for biology · ·Added 10 Nov 2026

Development of CYP8B1-specific inhibitors for metabolic diseases.

Zhipeng Fang, Alon Roy L Agua, Jennifer Jossart, Nisha Sharma, Xintian Lyu, Zhe Wang, Shili Zhang, Ji Sun, Linsen Shi, Juan Ayard, Maggie Chang, Jiahui Liu, Kevin Kou, John Shively, Adolfo Garcia-Ocana, David Horne, Holly Yin, Lihua Jin, J Jefferson P Perry, Wendong Huang

DOI ↗

Abstract

Changes in bile acids (BAs) balance lead to various metabolic diseases, yet current treatment options targeting these changes remain severely limited. CYP8B1 (cytochrome P450, family 8, subfamily B, polypeptide 1) is a liver-exclusive enzyme that controls the synthesis of 12α-hydroxylated (12α-OH) BAs. Inhibiting CYP8B1 is an attractive therapeutic strategy for attenuating 12α-OH BA levels, remodeling the gut microbiota and thereby ameliorating metabolic diseases. CYP8B1-specific inhibitors are currently lacking due to structural similarities between the active site of CYP8B1 and other CYPs, and the lack of suitable high-throughput screening (HTS) assays. Herein, we developed a highly sensitive, and specific enzyme-coupled fluorescence assay to detect CYP8B1 activity, making it ideal for HTS. Employing this assay, structure-based drug design by protein X-ray crystallography, structure- activity relationship (SAR) analyses, and in vitro and in vivo validation, we developed novel CYP8B1-specific small molecule inhibitors. The lead candidate alters BA composition, favorably remodels the gut microbiota, and corrects metabolic disease in a metabolic dysfunction-associated steatotic liver disease (MASLD) mouse model. These findings reveal that pharmacologically inhibiting CYP8B1 is able to reshape the BA and gut microbiota profiles and effectively ameliorates metabolic diseases. Overall, CYP8B1-specific inhibitors represent a first-in-class promising, safe and effective therapeutic strategy against metabolic disorders.

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