Human genomics · ·Added 10 Nov 2026

URBANOME: an exposome-based framework linking urban interventions to molecular, health, and policy-relevant outcomes.

Dimosthenis Sarigiannis, Alberto Gotti, Isabella Annesi Maesano, George Stefas, David Kocman, Beatriz Nunez, Ulrich Fahl, Anne Jensen, Begona Artinano, Marco Giovanni Persico, Iliriana Sejdullahu, Caroline Hood, Konstantinos Flokos, Spela Zalokar, Vasilis Voulgarakis, Panagiotis Bamidis, Christos Frantzidis, Marianthi Kermenidou, Nafsika Papaioannou, Catherine Gabriel, Ilias Frydas, Thanasis Papageorgiou, Dayna Schultz, Anthoula Chatzimpaloglou … Spyros Karakitsios (27 authors)

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Abstract

BACKGROUND: Urban environments expose residents to multiple simultaneous stressors that often act synergistically (e.g., air pollution and extreme heat amplifying cardiovascular and respiratory risks), contributing to a substantial public health burden. Environmental factors account for an estimated 13% of all deaths in the European Union, with ambient air pollution alone responsible for approximately 400,000 premature deaths per year. Most of this burden is mediated through chronic non-communicable diseases, including cardiovascular disease, stroke, cancer, respiratory disease, and mental health outcomes. Because these conditions are shaped by interacting environmental, social, and lifestyle determinants, traditional single-hazard approaches are insufficient, motivating adoption of an exposome paradigm. OBJECTIVE: This paper presents the URBANOME methodological framework, an integrated exposome-based architecture for evaluating urban interventions across external exposures, internal biological responses, functional health outcomes, and policy-relevant indicators, and reports illustrative pilot findings from its first multi-site implementation. METHODS: In a four-year Horizon 2020 study across nine European cities (Aarhus, Aberdeen, Athens, Ljubljana, Madrid, Milan, Montpellier, Stuttgart, and Thessaloniki), URBANOME implemented an integrated exposome framework through Urban Living Labs (ULLs). Co-created interventions (combining active mobility, urban greening, and traffic calming) were evaluated using a before-after design. Methods included ambient and personal exposure monitoring (wearable sensors, smartphone applications), agent-based population exposure modeling, validated health and well-being questionnaires, objective clinical measures (spirometry, blood pressure, heart rate variability), and multi-omics analyses (untargeted metabolomics and transcriptomics) on biological samples. A cost-benefit analysis quantified the economic return of interventions. RESULTS: The framework was successfully implemented across the nine ULLs, although intervention type, comparator availability, sample size, and follow-up duration varied by site (Table 1). Across paired participants, self-reported air-pollution annoyance and sleep-related breathing problems decreased between baseline and follow-up assessments, and pollution-related differences in forced vital capacity (FVC) were attenuated in higher-exposure neighbourhoods. In an exploratory pilot omics sub-cohort with paired pre/post samples, a four-metabolite panel (L-tyrosine, ascorbic acid, choline, coenzyme Q10) showed apparent perfect internal separation of pre- and post-intervention samples (apparent area under the receiver operating characteristic curve, AUROC ≈ 1.0); given the small sample size and absence of an independent held-out validation set, this result is preliminary and likely overoptimistic, and must be interpreted as a hypothesis-generating finding requiring external validation. Exploratory exposome-lifestyle analyses suggested that co-exposure to poor diet and higher pollution was associated with greater oxidative-stress-related metabolic signals, while combined healthy environments and lifestyles were associated with anti-inflammatory metabolite profiles. An exploratory cost-benefit analysis, based on value-transfer assumptions and standard health-economic unit costs, estimated benefit-cost ratios in the range of approximately €19-€143 per €1 invested across heterogeneous interventions; this range reflects substantial between-site variability and the assumptions detailed in the Methods, and should be interpreted as illustrative rather than as a precise return-on-investment estimate. CONCLUSIONS: This paper presents the URBANOME exposome-based evaluation framework and reports illustrative pilot findings from its multi-site implementation. The framework is feasible to deploy across heterogeneous European urban contexts and links external exposure assessment, internal biological profiling, functional health outcomes, and economic appraisal within a single architecture. Observed pre/post changes in self-reported, functional, and molecular endpoints are consistent with potentially beneficial responses to bundled urban interventions, but should be considered preliminary given the heterogeneous before-after design, variable comparator availability, small omics sub-cohorts, and short follow-up. External validation of the candidate biomarker panel and replication in independent settings are required before the framework's outputs can support firm conclusions about intervention effectiveness or cost-effectiveness.

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